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Can I add inline or margin comments to the pdf?

Yes, you can add inline or margin comments to your LaTeX pdfs with the todonotes package. If you include the command:

\usepackage[colorinlistoftodos]{todonotes}

in the preamble, you can then add comments with the

\todo{This is a comment that will appear in the margin}

command. Below is an example document with additional styles of comments demonstrated -- click the image or button to open up the template for editing