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GenNet: A Tool for Qualitative and Quantitative Modelling of Gene Regulatory Networks
GenNet: A Tool for Qualitative and Quantitative Modelling of Gene Regulatory Networks
Gene regulatory networks have an important role to study the behaviour of genes. By analysing these Gene Regulatory Networks we can get the detailed information i.e. the occurrence of diseases by changing behaviour of GRNs. Many different approaches are used (i.e. qualitative modelling and hybrid modelling) and various tools (i.e. GenoTech, GINsim) have been developed to model and simulate gene regulatory networks. GenoTech allows the user to specify a GRN on Graphical User Interface (GUI) according to the asynchronous multivalued logical functions of René Thomas, and to simulate and/or analyse its qualitative dynamical behaviour. René Thomas discrete modelling of gene regulatory network (GRN) is a well known approach to study the dynamics of genes. It deals with some parameters which reflect the possible targets of trajectories. Those parameters are priory unknown. These unknown parameters are fetched using another model checking tool SMBioNet. SMBioNet produces all the possible parameters satisfying the given Computational Logic Tree (CTL) formula as input. This approach involving logical parameters and conditions also known as qualitative modelling of GRN. However, this approach neglects the time delays for a gene to pass from one level of expression to another one i.e. inhibition to activation and vice versa. To find out these time delays, another modelling tool HyTech is used to perform hybrid modelling of GRN. We have developed a Java based tool called GenNet http://asanian.com/gennet to facilitate the model checking user by providing a unique GUI layout for both qualitative and quantitative modelling of GRNs. As we discussed, three separate modelling tools are used for complete modelling and analysis of a GRN. This process is much lengthy and takes too much time. GenNet assists the modelling users by providing some extra features i.e. CTL editor, parameters filtering and input/output files management. GenNet takes a GRN network as input and does all the rest of computations i.e. CTL verification, K-parameters generation, parameter implication to GRN, state graph, hybrid modelling and parameter filtration automatically. GenNet serves the user by computing the results within seconds that were taking hours and days of manual computation
LEEPIANS
WPP Template
WPP Template
The template of "white paper project" in CyberAgent, inc.
馬場惇
Final Technical Report Template for UC Davis EEC 136B WQ 2018
Final Technical Report Template for UC Davis EEC 136B WQ 2018
Template for final project reports for EEC 136AB Electronics Design Project, a senior capstone team-based design course at UC Davis.
Nicholas Hossain and Raj Amirtharajah
Review of Fault Tolerance Techniques in Distributed System
Review of Fault Tolerance Techniques in Distributed System
Distributed system is a collection of independent systems which can communicate with each other by transferring massages. There are some major issues in distributed systems but we focus in this paper on fault tolerance. It is the system’s ability to work in the condition when there occur any type of some fault in the system, like failure in communication, hardware or resources. It is a very important issue in distributed system, in this paper we present a survey of different types of fault tolerance techniques and their comparison.
Ayyaz
實驗一  基本測量
實驗一  基本測量
目的: 熟悉分析實驗數據的方法,測量並分析誤差。 學習有效數的處理。 了解螺旋測微器(Micrometer)的操作方式並用以測定微小物體的厚度或直徑等。 了解游標尺(Vernier caliper)的操作方式並用以測量塑膠管的深度及內、外徑。
黃雅柔
Keith's Game Design Document Template
Keith's Game Design Document Template
A useful document for game designers to layout your ideas in a way that makes sense to outsiders. It's not 100% necessary to have all of these sections always do what is best for your projects which may need special sections such as 'narrative' or if your project is far more script heavy then look into LaTeX plugins for UML and class diagrams to make your doc extra pretty.
Keith Witelson
A Latex Tutorial
A Latex Tutorial
This LaTeX tutorial will introduce LaTeX, creating a .tex file, sections, body text, tables, figures, mathematical formulas, acknowledgements, and references.
Daniel Ruatta
Base de datos NoSQL — Caso de estudio: Postgres como solución NoSQL
Base de datos NoSQL — Caso de estudio: Postgres como solución NoSQL
Las bases de datos relacionales han sido las herramientas por excelencia para el almacenamiento de la información en los sistemas informáticos. No obstante, las bases de datos NoSQL, como tendencia, han venido ganando espacio especialmente por la escalabilidad y velocidad en sus tiempos de respuestas. PostgreSQL ha incorporado algunas características de tipo NoSQL, como el almacenamiento efímero y el manejo de datos JSON; características que pueden aprovecharse para realizar acciones desde el gestor dándole mayor potencia. El objetivo de este artículo es evaluar, mediante toda la documentación encontrada, el comportamiento de las características NoSQL de PostgreSQL frente a un gestor NoSQL, comparandola con MongoDB, respecto a los tiempos de respuestas y dar a conocer las ventajas de uno con respecto al otro. Palabras Claves: Características NoSQL en PostgreSQL, MongoDB, PostgreSQL
Jean Carlos
devoir
devoir
devoir 1 ere annee niveu lycee
khaled

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